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DB built by FlyBase

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Gene: caz FBgn0285954

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Description

cabeza

Gene Synonyms

Location

Primary_assembly X: 16,288,810-16,293,520 forward strand.

BDGP6.54:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 74 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
caz-RB	FBtr0074217	1666	399aa	FBpp0073996	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q27294	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
caz-RE	FBtr0334992	1631	124aa	FBpp0307002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHV6	-	-
caz-RC	FBtr0334990	1621	384aa	FBpp0307000	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
caz-RD	FBtr0334991	1534	355aa	FBpp0307001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PH94	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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