Transcript: FBtr0100501 seq-RA

Description

sequoia

Gene Synonyms

Location

About this transcript

This transcript has 4 exons and is annotated with 36 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
seq-RA	FBtr0100501	3599	882aa	FBpp0099939	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z995 Q7YU02 Q95V81	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
seq-RB	FBtr0344198	5631	873aa	FBpp0310607	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFA2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 3,599 bps, Translation length: 882 residues

Version

FBtr0100501

Type

Protein coding

Annotation Method

Feature imported from FlyBase.