Transcript: FBtr0303660 para-RJ

Description

paralytic

Gene Synonyms

Location

Primary_assembly X: 16,463,603-16,527,414 reverse strand.

About this transcript

This transcript has 31 exons and is annotated with 69 domains and features.

Gene

This transcript is a product of gene FBgn0285944 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
para-RBF	FBtr0331170	6849	2145aa	FBpp0303597	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PJP5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
para-RBG	FBtr0342746	15578	2131aa	FBpp0309614	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P35500 X2JKQ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RAK	FBtr0303687	12006	2097aa	FBpp0292704	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS66	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RAC	FBtr0303679	11444	2084aa	FBpp0292696	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP5	-	-
para-RAN	FBtr0303690	6885	2143aa	FBpp0292707	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS92	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RY	FBtr0303675	6870	2138aa	FBpp0292692	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS79	-	-
para-RAJ	FBtr0303686	6852	2132aa	FBpp0292703	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSE6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RBA	FBtr0303703	6852	2132aa	FBpp0292720	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSA3	-	-
para-RAY	FBtr0303701	6852	2132aa	FBpp0292718	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSF1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RB	FBtr0111022	6849	2131aa	FBpp0110321	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RA	FBtr0074298	6849	2131aa	FBpp0074073	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P35500 X2JKQ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RC	FBtr0111023	6849	2131aa	FBpp0110322	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
para-RX	FBtr0303674	6831	2125aa	FBpp0292691	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP4	-	-
para-RP	FBtr0303666	6819	2121aa	FBpp0292683	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSD8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RU	FBtr0303671	6810	2118aa	FBpp0292688	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSE0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RD	FBtr0290121	6798	2114aa	FBpp0288560	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0Z2	-	-
para-RAO	FBtr0303691	6795	2113aa	FBpp0292708	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSE7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RAL	FBtr0303688	6789	2111aa	FBpp0292705	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS91	-	-
para-RAZ	FBtr0303702	6789	2111aa	FBpp0292719	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSE1	-	-
para-RT	FBtr0303670	6786	2110aa	FBpp0292687	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS75	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RAF	FBtr0303682	6786	2110aa	FBpp0292699	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSD2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RAE	FBtr0303681	6780	2108aa	FBpp0292698	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSE4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RF	FBtr0303656	6780	2108aa	FBpp0292673	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSD5	-	-
para-RE	FBtr0303655	6780	2108aa	FBpp0292672	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS61	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RAH	FBtr0303684	6777	2107aa	FBpp0292701	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RW	FBtr0303673	6762	2102aa	FBpp0292690	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS78	-	-
para-RN	FBtr0303664	6756	2100aa	FBpp0292681	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP2	-	-
para-RS	FBtr0303669	6756	2100aa	FBpp0292686	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP3	-	-
para-RM	FBtr0303663	6756	2100aa	FBpp0292680	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS69	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
para-RJ	FBtr0303660	6756	2100aa	FBpp0292677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS65	-	-
para-RAX	FBtr0303700	6753	2099aa	FBpp0292717	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSA0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RV	FBtr0303672	6747	2097aa	FBpp0292689	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSC7	-	-
para-RAP	FBtr0303692	6747	2097aa	FBpp0292709	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSD6	-	-
para-RH	FBtr0303658	6747	2097aa	FBpp0292675	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS66	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
para-RO	FBtr0303665	6732	2092aa	FBpp0292682	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS71	-	-
para-RAQ	FBtr0303693	6723	2089aa	FBpp0292710	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS95	-	-
para-RZ	FBtr0303676	6723	2089aa	FBpp0292693	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSE2	-	-
para-RAG	FBtr0303683	6723	2089aa	FBpp0292700	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS87	-	-
para-RG	FBtr0303657	6717	2087aa	FBpp0292674	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSB4	-	-
para-RL	FBtr0303662	6717	2087aa	FBpp0292679	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSB8	-	-
para-RAI	FBtr0303685	6714	2086aa	FBpp0292702	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS88	-	-
para-RAB	FBtr0303678	6714	2086aa	FBpp0292695	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS83	-	-
para-RAD	FBtr0303680	6714	2086aa	FBpp0292697	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS84	-	-
para-RAA	FBtr0303677	6708	2084aa	FBpp0292694	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP5	-	-
para-RAM	FBtr0303689	6705	2083aa	FBpp0292706	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP7	-	-
para-RR	FBtr0303668	6693	2079aa	FBpp0292685	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS73	-	-
para-RI	FBtr0303659	6693	2079aa	FBpp0292676	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP1	-	-
para-RQ	FBtr0303667	6684	2076aa	FBpp0292684	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSC3	-	-
para-RK	FBtr0303661	6684	2076aa	FBpp0292678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSD7	-	-
para-RBE	FBtr0303707	6665	917aa	FBpp0292724	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSE3	-	-
para-RAS	FBtr0303695	6657	2067aa	FBpp0292712	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS96	-	-
para-RBB	FBtr0303704	6654	2066aa	FBpp0292721	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSQ0	-	-
para-RAW	FBtr0303699	6642	2062aa	FBpp0292716	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP9	-	-
para-RAT	FBtr0303696	6624	2056aa	FBpp0292713	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSE9	-	-
para-RBD	FBtr0303706	6624	2056aa	FBpp0292723	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSF2	-	-
para-RBH	FBtr0344944	6621	2055aa	FBpp0311217	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JFE8	-	-
para-RAR	FBtr0303694	6607	240aa	FBpp0292711	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSP8	-	-
para-RAU	FBtr0303697	5965	1125aa	FBpp0292714	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSD9	-	-
para-RAV	FBtr0303698	5941	1117aa	FBpp0292715	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS99	-	-
para-RBC	FBtr0303705	5712	872aa	FBpp0292722	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSA4	-	-

Summary

Statistics

Exons: 31, Coding exons: 29, Transcript length: 6,756 bps, Translation length: 2,100 residues

Version

FBtr0303660

Type

Protein coding

Annotation Method

Feature imported from FlyBase.

Transcript: FBtr0303660 para-RJ

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Transcript: FBtr0303660 para-RJ

Summary

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