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DB built by WormBase

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Gene: deb-1 WBGene00000942

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Description

Vinculin [Source:NCBI gene;Acc:177482]

Location

Chromosome IV: 7,085,215-7,094,266 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 8 transcripts (splice variants), 87 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	ZC477.9d.1	3630	1090aa	ZC477.9d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ZC477.9a.1	3506	1010aa	ZC477.9a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	ZC477.9c.1	3472	999aa	ZC477.9c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9e.1	3240	1079aa	ZC477.9e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9b.1	1590	369aa	ZC477.9b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9f.1	1077	358aa	ZC477.9f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9h.1	699	232aa	ZC477.9h.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9g.1	666	221aa	ZC477.9g.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-

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Summary

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