Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
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Gene: deb-1 WBGene00000942

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Description

Vinculin [Source:UniProtKB/Swiss-Prot;Acc:P19826]

Location

Chromosome IV: 7,085,216-7,094,364 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 8 transcripts (splice variants), 127 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	ZC477.9d.1	3836	1090aa	ZC477.9d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CJ36	NP_001293743	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	ZC477.9e.1	3802	1079aa	ZC477.9e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CK82	NP_001293744	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	ZC477.9a.1	3603	1010aa	ZC477.9a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	NP_501104	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	ZC477.9c.1	3570	999aa	ZC477.9c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MPS2	NP_741437	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	ZC477.9b.1	1592	369aa	ZC477.9b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BI31	NP_501105
-	ZC477.9f.1	1551	358aa	ZC477.9f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLL2	NP_001293745
-	ZC477.9h.1	1235	232aa	ZC477.9h.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLG2	NP_001293747
-	ZC477.9g.1	1201	221aa	ZC477.9g.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLK1	NP_001293746

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Summary

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Gene-based displays