Hypoxia-inducible factor 1 [Source:NCBI gene;Acc:180359]
Chromosome V: 20,780,407-20,785,260 forward strand.
WBcel235:BX284605.5
This gene has 6 transcripts (splice variants), 50 orthologues and 1 paralogue.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
- | F38A6.3d.1 | 2856 | 665aa | F38A6.3d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGD2 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | F38A6.3b.1 | 2660 | 721aa | F38A6.3b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGD2 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
- | F38A6.3a.1 | 2647 | 719aa | F38A6.3a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGD2 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | F38A6.3f.1 | 2142 | 713aa | F38A6.3f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AXG6 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | F38A6.3e.1 | 2136 | 711aa | F38A6.3e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGD2 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | F38A6.3c.1 | 1576 | 503aa | F38A6.3c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGD2 | - | - |