Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by WormBase

.

Gene: atg-4.1 WBGene00013595

.

Description

Cysteine protease [Source:UniProtKB/TrEMBL;Acc:Q9NA30]

Location

Chromosome I: 13,536,892-13,542,703 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 3 transcripts (splice variants), 124 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y87G2A.3a.2	1997	454aa	Y87G2A.3a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NA30	NP_493375	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	Y87G2A.3b.1	1997	481aa	Y87G2A.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K8ESC5	NP_001263575	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	Y87G2A.3a.1	1651	454aa	Y87G2A.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NA30	NP_493375	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

.

Summary

.

.

Gene-based displays