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DB built by FlyBase

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Gene: kmr FBgn0085412

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Description

kramer

Gene Synonyms

Location

Primary_assembly 3R: 13,715,207-13,764,667 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 10 transcripts (splice variants) and 9 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
kmr-RI	FBtr0329899	10319	3090aa	FBpp0302933	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR01	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
kmr-RJ	FBtr0334567	10048	1308aa	FBpp0306634	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHA9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
kmr-RK	FBtr0334568	9215	2020aa	FBpp0306635	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR02	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
kmr-RH	FBtr0329898	9067	1974aa	FBpp0302932	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR03	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
kmr-RE	FBtr0112624	8745	2050aa	FBpp0111536	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR00	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
kmr-RB	FBtr0112622	7637	1974aa	FBpp0111534	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR03	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
kmr-RD	FBtr0112623	7109	2020aa	FBpp0111535	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR02 A8MZR2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
kmr-RF	FBtr0290011	7037	2020aa	FBpp0288450	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR02	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
kmr-RL	FBtr0334569	6840	2037aa	FBpp0306636	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGM4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
kmr-RG	FBtr0329897	6710	2042aa	FBpp0302931	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH30	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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