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DB built by FlyBase

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Gene: Top1 FBgn0004924

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Description

Topoisomerase 1

Location

Primary_assembly X: 15,319,479-15,328,029 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 5 transcripts (splice variants) and 132 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Top1-RC	FBtr0100294	5325	974aa	FBpp0099689	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q494M1	NM_001014742 NM_001014742.2 NM_078606.4 NP_001014742 NP_001014742.1 NP_511161.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Top1-RD	FBtr0308699	4600	970aa	FBpp0300905	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDX3 Q1WWG8	NM_001258750 NM_001258750.2 NP_001245679 NP_001245679.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Top1-RA	FBtr0074005	4265	974aa	FBpp0073822	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P30189 Q494M1	NM_001014742.2 NM_078606 NM_078606.4 NP_001014742.1 NP_511161 NP_511161.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Top1-RE	FBtr0340434	3942	593aa	FBpp0309379	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JKD2	NM_001298338 NM_001298338.1 NP_001285267 NP_001285267.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Top1-RB	FBtr0074006	2378	581aa	FBpp0073823	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TPA7 Q8IR39	NM_167435 NM_167435.3 NP_727841 NP_727841.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays