Summary
- Splice variants
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DB built by FlyBase

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Gene: Pkn FBgn0020621

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Description

Protein kinase N

Gene Synonyms

Location

Primary_assembly 2R: 9,252,310-9,285,097 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 16 transcripts (splice variants), 189 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pkn-RG	FBtr0112897	6552	1501aa	FBpp0111810	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DY76 Q960L7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Pkn-RD	FBtr0088604	6520	1422aa	FBpp0087685	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7T3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RK	FBtr0302604	6111	1354aa	FBpp0291760	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD07 C8VUY9 C8VUZ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RH	FBtr0301511	5901	1284aa	FBpp0290726	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JH15	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RF	FBtr0088603	5869	1205aa	FBpp0087684	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7T2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RB	FBtr0088601	5747	1190aa	FBpp0087682	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7T0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RN	FBtr0339290	5082	1477aa	FBpp0308399	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFX2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RJ	FBtr0302603	4970	1275aa	FBpp0291759	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K727	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RC	FBtr0088602	4872	1407aa	FBpp0087683	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7T1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RL	FBtr0306585	4562	1275aa	FBpp0297540	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K727	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RP	FBtr0339292	4491	1280aa	FBpp0308401	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LEI8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RS	FBtr0433506	4490	1354aa	FBpp0390638	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD07	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RQ	FBtr0339293	4485	1278aa	FBpp0308402	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF03	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RM	FBtr0308206	4431	1260aa	FBpp0300526	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6U3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RO	FBtr0339291	4152	1167aa	FBpp0308400	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LEY5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pkn-RE	FBtr0088605	3617	590aa	FBpp0087686	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7T4 Q7YU74	-	-

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Summary

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