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DB built by FlyBase

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Gene: l(2)k05819 FBgn0022153

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Description

lethal (2) k05819

Gene Synonyms

Location

Primary_assembly 2L: 4,394,196-4,400,487 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 130 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
l(2)k05819-RA	FBtr0077432	4864	1449aa	FBpp0077122	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4G7D1 Q961P5 Q9VQZ1	NM_164582 NM_164582.3 NP_722974 NP_722974.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
l(2)k05819-RD	FBtr0331447	5201	1434aa	FBpp0303864	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E8NHA9 Q7KU45	NM_001273094 NM_001273094.1 NM_134985.4 NP_001260023 NP_001260023.1 NP_608829.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
l(2)k05819-RC	FBtr0305968	4819	1434aa	FBpp0297110	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KU45	NM_001273094.1 NM_134985 NM_134985.4 NP_001260023.1 NP_608829 NP_608829.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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