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DB built by FlyBase

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Gene: wcy FBgn0030812

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Description

wacky

Gene Synonyms

Location

Primary_assembly X: 17,068,717-17,077,897 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 6 transcripts (splice variants) and 96 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
wcy-RF	FBtr0310525	4624	876aa	FBpp0302662	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHE3	NM_001272707 NM_001272707.1 NP_001259636 NP_001259636.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
wcy-RD	FBtr0304840	4773	834aa	FBpp0293380	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX88	NM_001258796 NM_001258796.2 NM_132959.3 NP_001245725 NP_001245725.1 NP_573187.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wcy-RG	FBtr0330596	4532	860aa	FBpp0303447	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHX3	NM_001272708 NM_001272708.1 NP_001259637 NP_001259637.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wcy-RA	FBtr0074412	4532	834aa	FBpp0074186	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX88	NM_001258796.2 NM_132959 NM_132959.3 NP_001245725.1 NP_573187 NP_573187.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wcy-RE	FBtr0310524	4511	838aa	FBpp0302661	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEY4	NM_001272706 NM_001272706.2 NP_001259635 NP_001259635.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wcy-RC	FBtr0304839	4466	832aa	FBpp0293379	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R9PY73	NM_001103538 NM_001103538.4 NP_001097008 NP_001097008.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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