Summary
- Splice variants
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DB built by FlyBase

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Gene: CG5059 FBgn0037007

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Gene Synonyms

Location

Primary_assembly 3L: 20,514,598-20,519,393 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 5 transcripts (splice variants) and 89 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5059-RA	FBtr0078216	1725	201aa	FBpp0077874	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPD6	NM_140982 NM_140982.2 NP_649239 NP_649239.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG5059-RC	FBtr0078217	1905	177aa	FBpp0077875	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPU7	NM_001275188.1 NM_168865 NM_168865.2 NM_206403.2 NP_001262117.1 NP_730552 NP_730552.1 NP_996125.1	-
CG5059-RE	FBtr0331567	1543	177aa	FBpp0303957	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPU7	NM_001275188 NM_001275188.1 NM_168865.2 NM_206403.2 NP_001262117 NP_001262117.1 NP_730552.1 NP_996125.1	-
CG5059-RD	FBtr0078219	1477	177aa	FBpp0077877	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPU7	NM_001275188.1 NM_168865.2 NM_206403 NM_206403.2 NP_001262117.1 NP_730552.1 NP_996125 NP_996125.1	-
CG5059-RB	FBtr0078218	1344	193aa	FBpp0077876	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DN08 Q8IPU8	NM_168864 NM_168864.2 NP_730551 NP_730551.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays