Vesicular monoamine transporter
Primary_assembly 2R: 13,513,132-13,534,251 reverse strand.
BDGP6.32:AE013599.5
This gene has 4 transcripts (splice variants), 134 orthologues and 2 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Vmat-RD | FBtr0091492 | 2446 | 646aa | FBpp0090962 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IH57 | NM_001014525 NM_001014525.3 NP_001014525 NP_001014525.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Vmat-RE | FBtr0091491 | 7325 | 610aa | FBpp0090961 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86NW1 | NM_001014524.2 NM_001014526 NM_001014526.2 NM_001274027.2 NP_001014524.1 NP_001014526 NP_001014526.1 NP_001260956.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Vmat-RF | FBtr0310062 | 7141 | 610aa | FBpp0301763 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86NW1 Q8IGS0 Q8MT20 | NM_001014524.2 NM_001014526.2 NM_001274027 NM_001274027.2 NP_001014524.1 NP_001014526.1 NP_001260956 NP_001260956.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Vmat-RC | FBtr0091493 | 2470 | 610aa | FBpp0090963 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86NW1 | NM_001014524 NM_001014524.2 NM_001014526.2 NM_001274027.2 NP_001014524 NP_001014524.1 NP_001014526.1 NP_001260956.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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